STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000002464Small nuclear ribonucleoprotein F-like. (84 aa)    
Predicted Functional Partners:
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.995
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.995
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.995
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.994
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.992
SNRPB
Small nuclear ribonucleoprotein-associated protein B.
   
 0.984
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
  
  
 
0.902
ENSCPBP00000007921
Small nuclear ribonucleoprotein F-like.
  
  
 
0.901
ENSCPBP00000034817
Small nuclear ribonucleoprotein F-like.
  
  
 
0.901
PHF5A
PHD finger-like domain-containing protein 5A.
   
 0.881
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.