STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSPH14Radial spoke head 14 homolog. (340 aa)    
Predicted Functional Partners:
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.759
WDR90
WD repeat domain 90.
    
   0.669
SAXO2
Stabilizer of axonemal microtubules 2.
   
 
 0.637
CCDC65
Coiled-coil domain containing 65.
   
 
 0.632
DLEC1
DLEC1 cilia and flagella associated protein.
    
 
 0.629
LRRC34
Leucine rich repeat containing 34.
    
 
 0.628
SPATA18
Spermatogenesis associated 18.
   
  
 0.626
CFAP161
Cilia and flagella associated protein 161.
   
  
 0.606
TSNAXIP1
Translin associated factor X interacting protein 1.
   
  
 0.587
ANKEF1
Ankyrin repeat and EF-hand domain containing 1.
   
 
 0.585
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.