STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000003094Uncharacterized LOC101948561. (346 aa)    
Predicted Functional Partners:
GPC6
Glypican 6.
 
     0.914
SDC2
Syndecan 2.
    
 0.570
ENSCPBP00000021806
annotation not available
     
 0.568
SLIT2
Slit guidance ligand 2.
    
 0.549
ENSCPBP00000014589
annotation not available
    
 0.535
NOTUM
NOTUM, palmitoleoyl-protein carboxylesterase.
    
 0.535
B4GALT7
Xylosylprotein 4-beta-galactosyltransferase.
     
 0.500
ENSCPBP00000001393
Glypican-6-like.
  
     0.473
EXT2
Glucuronyl/N-acetylglucosaminyl transferase EXT2.
     
 0.473
EGFLAM
EGF like, fibronectin type III and laminin G domains.
     
 0.463
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.