STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASQ2Calsequestrin 2. (402 aa)    
Predicted Functional Partners:
ASPH
Aspartate beta-hydroxylase.
   
 0.960
RYR2
Ryanodine receptor 2.
   
 0.940
RYR3
Ryanodine receptor 3.
   
 0.940
CASQ1
Calsequestrin 1.
  
  
 
0.901
NIPBL
Cohesin loading factor subunit SCC2.
    
 0.818
ENSCPBP00000026169
annotation not available
   
 
 0.748
MYL1
Myosin light chain 1.
   
 0.696
AMPD1
Adenosine monophosphate deaminase 1.
   
  
 0.654
SKP1
S-phase kinase associated protein 1.
    
 0.614
MYOZ1
Myozenin 1.
   
  
 0.612
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.