STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD1LChromodomain helicase DNA binding protein 1 like. (886 aa)    
Predicted Functional Partners:
PARP1
Poly [ADP-ribose] polymerase 1.
   
 0.892
ENSCPBP00000006613
annotation not available
   
 0.785
DDB2
Damage specific DNA binding protein 2.
   
 0.737
XPA
XPA, DNA damage recognition and repair factor.
    
 0.730
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.724
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
   
 
 0.701
BAZ1B
Bromodomain adjacent to zinc finger domain protein 1B.
    
 0.701
RPA1
Replication protein A1.
   
 0.698
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.696
FANCM
Fanconi anemia complementation group M.
   
 0.682
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.