STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFM1Ubiquitin fold modifier 1. (85 aa)    
Predicted Functional Partners:
UBA5
Ubiquitin like modifier activating enzyme 5.
    
 
 0.977
UFSP2
UFM1 specific peptidase 2.
    
 
 0.957
UFSP1
UFM1 specific peptidase 1 (inactive).
    
 
 0.943
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
   
 
 0.920
UFL1
E3 UFM1-protein ligase 1.
   
 
 0.761
DDRGK1
DDRGK domain containing 1.
    
 
 0.748
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 
 0.721
NEDD8
Neural precursor cell expressed, developmentally down-regulated 8.
    
 
 0.692
UBA1
Ubiquitin like modifier activating enzyme 1.
   
 
 0.627
UBA7
Ubiquitin like modifier activating enzyme 7.
   
 
 0.627
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.