STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (339 aa)    
Predicted Functional Partners:
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
   
 0.916
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
  
 
0.900
RPAP2
RNA polymerase II associated protein 2.
   
 0.890
XRN2
5'-3' exoribonuclease 2.
   
 
 0.856
DXO
Decapping exoribonuclease.
    
 
 0.851
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
    
 0.839
ENSCPBP00000024391
annotation not available
    
 0.839
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
    
 0.828
POLR2D
DNA-directed RNA polymerase II subunit RPB4.
    
  0.793
RPRD2
Regulation of nuclear pre-mRNA domain containing 2.
    
0.765
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.