STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD54BDNA repair and recombination protein RAD54B. (920 aa)    
Predicted Functional Partners:
RAD54L
DNA repair and recombination protein RAD54 and RAD54-like protein.
  
 
0.964
RAD51
DNA repair protein RAD51.
  
 
 0.907
WRN
Werner syndrome ATP-dependent helicase.
  
 
 0.856
FANCM
Fanconi anemia complementation group M.
   
 0.852
RAD51D
RAD51-like protein 3.
  
 
 0.737
RAD51B
RAD51-like protein 1.
  
 
 0.737
RAD52
DNA repair and recombination protein RAD52.
    
 
 0.730
FBH1
F-box protein, helicase, 18.
   
 
 0.719
DMC1
Meiotic recombination protein DMC1.
  
 
 0.715
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.708
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.