STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC30ATetratricopeptide repeat domain 30A. (667 aa)    
Predicted Functional Partners:
IFT52
Intraflagellar transport protein 52.
    
 0.989
IFT88
Intraflagellar transport protein 88.
    
 0.988
IFT81
Intraflagellar transport protein 81.
    
 0.985
IFT172
Intraflagellar transport protein 172.
   
 0.983
IFT57
Intraflagellar transport protein 57.
   
 0.980
IFT46
Intraflagellar transport 46.
    
 0.980
CLUAP1
Clusterin associated protein 1.
   
 0.979
IFT74
Intraflagellar transport protein 74.
    
 0.978
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.978
ENSCPBP00000029723
annotation not available
    
 0.961
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.