STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSMCE4ANSE4 homolog A, SMC5-SMC6 complex component. (389 aa)    
Predicted Functional Partners:
NSMCE1
Non-structural maintenance of chromosomes element 1.
   
 0.999
ENSCPBP00000011351
Non-structural maintenance of chromosomes element 3.
   
 0.999
SMC6
Structural maintenance of chromosomes protein 6.
   
 0.999
SMC5
Structural maintenance of chromosomes protein 5.
   
 0.999
NSMCE2
NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.999
ENSCPBP00000035228
annotation not available
   
 0.970
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
 0.913
SMC1A
Structural maintenance of chromosomes 1A.
   
 0.860
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.860
SMC4
Structural maintenance of chromosomes 4.
   
 0.857
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.