STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG3Ubiquitin-like-conjugating enzyme ATG3. (313 aa)    
Predicted Functional Partners:
ATG7
Ubiquitin-like modifier-activating enzyme ATG7.
    
 0.999
ATG12
Ubiquitin-like protein ATG12.
    
 0.999
ATG5
Autophagy-related protein 5.
   
 0.999
ATG16L1
Autophagy-related protein 16-1.
   
 0.997
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.996
GABARAPL1
GABA type A receptor associated protein like 1.
  
 0.995
ATG16L2
Autophagy-related protein 16-2.
   
 0.994
GABARAP
GABA type A receptor-associated protein.
  
 0.952
ENSCPBP00000010556
CASP8 and FADD-like apoptosis regulator.
    
 0.946
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.938
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.