STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000004322HLA class II histocompatibility antigen, DR alpha chain-like. (125 aa)    
Predicted Functional Partners:
CD74
CD74 molecule.
   
 0.949
ENSCPBP00000013847
T cell receptor alpha chain V region.
     
  0.901
CD4
T-cell surface glycoprotein CD4.
     
  0.901
ENSCPBP00000010910
HLA class II histocompatibility antigen, DM beta chain.
   
  0.514
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
  
0.435
RPS14
Small subunit ribosomal protein S14e.
   
 0.429
ENSCPBP00000027968
annotation not available
   
 0.429
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.