STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TADA1Transcriptional adapter 1. (336 aa)    
Predicted Functional Partners:
SUPT20H
SPT20 homolog, SAGA complex component.
    
 
 0.993
TRRAP
Transformation/transcription domain associated protein.
   
 
 0.992
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.992
TAF10
Transcription initiation factor TFIID subunit 10.
    
 
 0.990
TAF12
Transcription initiation factor TFIID subunit 12.
    
 
 0.990
TAF9
Transcription initiation factor TFIID subunit 9.
   
 
 0.989
TADA3
Transcriptional adapter 3.
    
 
 0.968
TADA2A
Transcriptional adapter 2-alpha.
    
 
 0.960
SGF29
SAGA complex associated factor 29.
    
 
 0.959
USP22
Ubiquitin carboxyl-terminal hydrolase 22/27/51.
    
   0.946
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.