STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDS5BSister chromatid cohesion protein PDS5. (1446 aa)    
Predicted Functional Partners:
WAPL
WAPL cohesin release factor.
   
 0.990
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
 0.981
NIPBL
Cohesin loading factor subunit SCC2.
   
 0.937
SMC1A
Structural maintenance of chromosomes 1A.
   
 0.931
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.931
RAD21
RAD21 cohesin complex component.
   
 0.930
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.930
REC8
REC8 meiotic recombination protein.
   
 0.874
ESCO2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
   
 0.870
ENSCPBP00000000964
annotation not available
   
 0.867
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.