STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCED1APC-esterase domain containing 1A. (443 aa)    
Predicted Functional Partners:
SLX4IP
SLX4 interacting protein.
      
 0.608
SNX13
Sorting nexin 13.
      
 0.577
RPP25L
Ribonucleases P/MRP protein subunit RPP25.
      
 0.483
RER1
Retention in endoplasmic reticulum sorting receptor 1.
      
 0.480
VPS16
Vacuolar protein sorting-associated protein 16.
   
  
 0.473
RBM26
RNA binding motif protein 26.
      
 0.463
ZNF711
Zinc finger protein 711.
      
 0.459
VPS50
VPS50, EARP/GARPII complex subunit.
      
 0.457
RNF24
Ring finger protein 24.
      
 0.452
SNX25
Sorting nexin 25.
      
 0.446
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.