STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000004635Parkinson disease 7 domain-containing protein 1-like. (115 aa)    
Predicted Functional Partners:
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.796
CRYZL1
Crystallin zeta like 1.
   
   0.740
TNNI3
Troponin I3, cardiac type.
   
 0.654
TNNI2
Troponin I, fast skeletal muscle.
   
 0.654
ENSCPBP00000031679
annotation not available
   
 0.654
TNNI1
Troponin I, slow skeletal muscle.
   
 0.654
C12orf4
Chromosome unknown open reading frame, human C12orf4.
    
   0.626
MYZAP
Myocardial zonula adherens protein.
   
 0.584
TPM4
Tropomyosin 4.
   
 0.584
TPM1
Tropomyosin 1 (alpha).
   
 0.584
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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