STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF1PHD finger protein 1. (540 aa)    
Predicted Functional Partners:
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.914
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.911
EED
Embryonic ectoderm development.
   
 0.879
JARID2
Jumonji and AT-rich interaction domain containing 2.
    
 0.878
INTS1
Integrator complex subunit 1.
    
 0.858
INTS3
Integrator complex subunit 3.
    
 0.839
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.820
KDM6B
Lysine demethylase 6B.
    
 0.761
KDM6A
Lysine-specific demethylase 6A.
    
 0.761
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.750
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.