STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC24BSEC24 homolog B, COPII coat complex component. (1218 aa)    
Predicted Functional Partners:
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.999
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.991
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.991
SEC23B
Sec23 homolog B, coat complex II component.
   
0.933
SEC23A
Sec23 homolog A, coat complex II component.
   
0.933
SEC22B
SEC22 homolog B, vesicle trafficking protein.
    
 0.915
SEC16A
SEC16 homolog A, endoplasmic reticulum export factor.
   
 0.887
SEC16B
SEC16 homolog B, endoplasmic reticulum export factor.
   
 0.887
SAR1B
Secretion associated Ras related GTPase 1B.
   
 0.880
SAR1A
Secretion associated Ras related GTPase 1A.
   
 0.880
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.