STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK12Cyclin-dependent kinase 12/13. (1485 aa)    
Predicted Functional Partners:
CCNK
Cyclin K.
   
 0.971
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.929
POLR2A
DNA-directed RNA polymerase II subunit RPB1.
   
 0.876
ENSCPBP00000024391
annotation not available
   
 0.876
CCNT1
Cyclin T1.
   
 0.855
CCNT2
Cyclin T2.
   
 0.852
CCNQ
Family with sequence similarity 58 member A.
   
 0.824
CTDP1
RNA polymerase II subunit A C-terminal domain phosphatase.
   
 0.812
CCNH
Cyclin H.
    
 0.793
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
   
 0.781
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.