STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASP6Caspase 6. (307 aa)    
Predicted Functional Partners:
CASP9
Caspase 9.
    
0.961
CASP8
Caspase 8.
   
0.955
ENSCPBP00000015870
Caspase-8-like.
   
0.955
LMNB2
Lamin B2.
   
 0.954
LMNB1
Lamin B1.
   
 0.954
ENSCPBP00000015055
Prelamin-A/C-like.
   
 0.954
LMNA
Lamin A/C.
   
 0.954
ENSCPBP00000024743
Lamin-L(III)-like.
    
 0.934
ACTG1
Actin beta/gamma 1.
    
 0.910
ACTB
Actin beta/gamma 1.
    
 0.910
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.