STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APAF1Apoptotic peptidase activating factor 1. (1252 aa)    
Predicted Functional Partners:
ENSCPBP00000004008
Cytochrome c, testis-specific.
   
 0.999
ENSCPBP00000032025
Cytochrome c.
   
 0.999
CASP9
Caspase 9.
    
 0.999
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.992
NPVF
Neuropeptide VF precursor.
   
 0.985
AVEN
Apoptosis and caspase activation inhibitor.
    
 0.979
BIRC6
Baculoviral IAP repeat-containing protein 6 (apollon).
   
 0.892
XIAP
E3 ubiquitin-protein ligase XIAP.
   
 0.870
APIP
Methylthioribulose-1-phosphate dehydratase.
    
 0.854
CASP7
Caspase 7.
    
 0.850
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.