STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000005880annotation not available (500 aa)    
Predicted Functional Partners:
TEX10
Pre-rRNA-processing protein IPI1.
    
 0.813
WDR18
WD repeat domain 18.
    
 0.789
LAS1L
LAS1 like, ribosome biogenesis factor.
   
 0.771
SUMO1
Small ubiquitin-related modifier.
   
 0.754
SUMO3
Small ubiquitin-related modifier.
   
 0.686
ENSCPBP00000040962
annotation not available
   
 0.686
ENSCPBP00000040963
annotation not available
   
 0.686
NFATC2IP
Nuclear factor of activated T-cells 2 interacting protein.
   
 0.683
NOL9
Polynucleotide 5'-hydroxyl-kinase GRC3/NOL9.
   
 0.674
SENP6
SUMO1/sentrin specific peptidase 6.
    
 0.659
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.