STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD5ATPase family, AAA domain containing 5. (1843 aa)    
Predicted Functional Partners:
RFC3
Replication factor C subunit 3/5.
   
 0.990
RFC4
Replication factor C subunit 2/4.
   
 0.989
RFC5
Replication factor C subunit 3/5.
   
 0.986
WRN
Werner syndrome ATP-dependent helicase.
   
 0.984
RFC2
Replication factor C subunit 2/4.
   
 0.982
PCNA
Proliferating cell nuclear antigen.
   
 0.978
RAD17
RAD17 checkpoint clamp loader component.
   
 0.943
WDHD1
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.942
EXO1
Exonuclease 1.
   
 0.927
CHTF18
Chromosome transmission fidelity protein 18.
   
0.906
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.