STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOXThymocyte selection associated high mobility group box. (527 aa)    
Predicted Functional Partners:
ACTR8
ARP8 actin-related protein 8 homolog.
    
 0.588
POLRMT
RNA polymerase mitochondrial.
    
 0.572
RUVBL1
RuvB-like protein 1 (pontin 52).
    
 0.561
ACTR5
ARP5 actin-related protein 5 homolog.
    
 0.561
GTF2H1
Transcription initiation factor TFIIH subunit 1.
    
 0.558
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.546
GTF2H3
Transcription initiation factor TFIIH subunit 3.
    
 0.542
ARID4B
AT-rich interactive domain-containing protein 4B.
   
 0.538
ARID4A
AT-rich interactive domain-containing protein 4A.
   
 0.538
GTF2H4
General transcription factor IIH subunit 4.
    
 0.526
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.