STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAHD2AFumarylacetoacetate hydrolase domain containing 2A. (359 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase.
  
 
 0.857
CFAP20
Cilia and flagella associated protein 20.
      
 0.692
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
 0.610
VARS1
Valyl-tRNA synthetase.
  
 
 0.584
HMGCL
3-hydroxymethyl-3-methylglutaryl-CoA lyase.
  
 
 0.525
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
  
 
 0.525
ALDH2
Aldehyde dehydrogenase 2 family (mitochondrial).
  
 0.514
ALDH1A2
Aldehyde dehydrogenase 1 family member A2.
  
 0.514
ALDH5A1
Aldehyde dehydrogenase 5 family member A1.
  
 0.514
ALDH9A1
Aldehyde dehydrogenase 9 family member A1.
  
 0.514
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.