STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXA3Forkhead box protein A3, hepatocyte nuclear factor 3-gamma. (413 aa)    
Predicted Functional Partners:
GATA6
GATA binding protein 6.
   
 0.638
GATA1
GATA binding protein 1.
  
 0.628
HHEX
Hematopoietically expressed homeobox.
   
  
 0.603
NRIP1
Nuclear receptor interacting protein 1.
     
 0.596
HNF1A
Transcription factor 1, hepatocyte nuclear factor 1-alpha.
   
 
 0.588
NR1I3
Nuclear receptor subfamily 1 group I member 3.
    
 0.566
GATA4
GATA binding protein 4.
   
 0.532
GATA5
GATA binding protein 5.
   
 0.532
TRPS1
Transcriptional repressor GATA binding 1.
    
 0.512
GATA2
GATA binding protein 2.
    
 0.498
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.