STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYZAPMyocardial zonula adherens protein. (477 aa)    
Predicted Functional Partners:
POLR2M
RNA polymerase II subunit M.
 
      0.870
ENSCPBP00000004635
Parkinson disease 7 domain-containing protein 1-like.
   
 0.641
TNNT3
Troponin T, fast skeletal muscle.
   
 0.641
TNNT1
Troponin T1, slow skeletal type.
   
 0.641
PDDC1
Parkinson disease 7 domain containing 1.
   
 0.641
TNNT2
Troponin T, cardiac muscle.
   
 0.641
SMIM20
Small integral membrane protein 20.
   
 0.641
KXD1
KxDL motif-containing protein 1.
   
   0.626
SH3RF3
SH3 domain containing ring finger 3.
   
  0.613
TNNI3
Troponin I3, cardiac type.
   
 0.597
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.