STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM13AFamily with sequence similarity 13 member A. (699 aa)    
Predicted Functional Partners:
ENSCPBP00000006201
annotation not available
 
    
 0.678
IREB2
Iron responsive element binding protein 2.
      
 0.545
HHIP
Hedgehog interacting protein.
    
 
 0.489
PYURF
PIGY upstream reading frame.
      
 0.472
FAM43A
Family with sequence similarity 43 member A.
      
 0.465
SIRT1
NAD+-dependent protein deacetylase sirtuin 1.
      
 0.465
PIGY
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y.
      
 0.457
FAM184B
Family with sequence similarity 184 member B.
      
 0.441
SCLY
Selenocysteine lyase.
      
 0.400
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.