STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HERC6-2HECT and RLD domain containing E3 ubiquitin protein ligase family member 6. (1032 aa)    
Predicted Functional Partners:
HERC4
HECT and RLD domain containing E3 ubiquitin protein ligase 4.
  
 
0.920
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 0.551
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.544
ND4
NADH-ubiquinone oxidoreductase chain 4.
    
 
 0.486
RABGEF1
RAB guanine nucleotide exchange factor 1.
    
 0.453
DPH3
Diphthamide biosynthesis protein 3.
    
 
 0.448
ENSCPBP00000003978
RING finger protein 151-like.
    
 
 0.431
ADGRB1
Adhesion G protein-coupled receptor B1.
    
 0.426
ADGRB2
Adhesion G protein-coupled receptor B2.
    
 0.426
ADGRD1
Adhesion G protein-coupled receptor D1.
    
 0.426
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.