STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5ASemaphorin 5A. (1077 aa)    
Predicted Functional Partners:
PLXNB1
Plexin B1.
    
0.648
PLXNB3
Plexin B3.
    
 0.648
PLXNB2
Plexin-B2-like.
    
0.648
NRP1
Neuropilin 1.
    
 0.634
MST1R
Macrophage stimulating 1 receptor.
    
 0.625
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.625
ASNS
Asparagine synthetase (glutamine-hydrolyzing).
      
 0.479
PLXNC1
Plexin C1.
    
 0.457
ADAR
Double-stranded RNA-specific adenosine deaminase.
      
 0.445
PLXND1
Plexin D1.
    
 0.428
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.