STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPT1Lipoyltransferase 1. (373 aa)    
Predicted Functional Partners:
LIAS
Lipoic acid synthetase.
  
 
 0.996
GCSH
Glycine cleavage system H protein.
   
 0.980
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase II.
    
 0.915
BCKDHA
Branched chain keto acid dehydrogenase E1, alpha polypeptide.
  
 
 0.901
DLAT
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.891
MECR
Mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase.
    
 0.888
PDHX
Dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex.
  
 0.867
PDHB
Pyruvate dehydrogenase E1 component beta subunit.
  
 
 0.866
BCKDHB
2-oxoisovalerate dehydrogenase E1 component beta subunit.
  
 
 0.865
DLST
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
  
 0.859
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.