STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH7Synovial sarcoma, X breakpoint 2 interacting protein. (168 aa)    
Predicted Functional Partners:
SSX2IP
Synovial sarcoma, X breakpoint 2 interacting protein.
 
   
  0.900
ACTN4
Actinin alpha 1/4.
     
  0.900
ACTN1
Actinin alpha 1/4.
     
  0.900
ALKBH6
Alkylated DNA repair protein alkB homolog 6.
   
  
 0.711
FTO
FTO, alpha-ketoglutarate dependent dioxygenase.
     
 0.671
ALKBH4
alkB homolog 4, lysine demethylase.
   
  
 0.644
ALKBH8
Alkylated DNA repair protein alkB homolog 8.
      
 0.586
ALKBH1
Alkylated DNA repair protein alkB homolog 1.
      
 0.581
AVPI1
Arginine vasopressin induced 1.
      
 0.571
NCKIPSD
NCK interacting protein with SH3 domain.
      
 0.564
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.