STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLTubulin---tyrosine ligase. (377 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA-decapping protein 3.
    
 
 0.888
LRRC49
Leucine-rich repeat-containing protein 49.
    
 0.655
TPGS2
Tubulin polyglutamylase complex subunit 2.
   
 0.614
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.586
NICN1
Nicolin 1.
   
 0.585
TTLL4
Tubulin tyrosine ligase like 4.
   
  
0.579
SVBP
Small vasohibin binding protein.
      
 0.576
DCP2
MRNA-decapping enzyme subunit 2.
    
 
 0.565
STMN4
Stathmin 4.
    
 
 0.560
DCP1B
MRNA-decapping enzyme 1B.
    
 
 0.495
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.