STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000006818Uncharacterized LOC101933606. (1453 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.750
JUP
Junction plakoglobin.
   
 0.699
TLNRD1
Mesoderm development candidate 1.
   
 0.639
TLN2
Talin 2.
   
 0.639
TLN1
Talin 1.
   
 0.639
ARVCF
Armadillo repeat gene deleted in velocardiofacial syndrome.
   
 0.611
CTNND1
Catenin (cadherin-associated protein), delta 1.
   
 0.611
VCL
Vinculin.
    
 
0.584
PKP4
Plakophilin 4.
   
 0.566
ENSCPBP00000038322
annotation not available
   
 0.566
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.