STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFF1AF4/FMR2 family member 1. (1218 aa)    
Predicted Functional Partners:
EAF1
ELL associated factor 1.
    
 0.989
CDK9
Cyclin dependent kinase 9.
    
 0.987
CCNT1
Cyclin T1.
   
 0.973
MLLT1
MLLT1, super elongation complex subunit.
    
 0.936
MLLT3
MLLT3, super elongation complex subunit.
    
 0.936
ENSCPBP00000023160
annotation not available
    
0.935
AFF4
AF4/FMR2 family member 4.
    
0.935
CCNT2
Cyclin T2.
   
 0.895
ELL2
Elongation factor for RNA polymerase II 2.
    
 0.857
ELL
Elongation factor for RNA polymerase II.
    
 0.857
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.