STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP7La ribonucleoprotein domain family member 7. (593 aa)    
Predicted Functional Partners:
MEPCE
7SK snRNA methylphosphate capping enzyme.
    
 
 0.967
CDK9
Cyclin dependent kinase 9.
   
 0.947
CCNT1
Cyclin T1.
   
 0.893
HEXIM1
Hexamethylene bisacetamide inducible 1.
    
 
 0.862
CCNT2
Cyclin T2.
   
 0.782
SART3
Squamous cell carcinoma antigen recognized by T-cells 3.
   
 0.678
DDX18
ATP-dependent RNA helicase DDX18/HAS1.
   
 0.640
FAU
FAU, ubiquitin like and ribosomal protein S30 fusion.
   
 0.622
LYAR
Cell growth-regulating nucleolar protein.
   
  
 0.611
ENSCPBP00000013123
annotation not available
   
 0.577
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.