STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD2BP2CD2 cytoplasmic tail binding protein 2. (84 aa)    
Predicted Functional Partners:
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 
 0.991
DDX23
ATP-dependent RNA helicase DDX23/PRP28.
   
 
 0.949
TXNL4A
U5 snRNP protein, DIM1 family.
    
 
 0.935
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.932
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.917
PRPF6
Pre-mRNA processing factor 6.
   
 
 0.914
SART1
Squamous cell carcinoma antigen recognized by T-cells 1.
   
 
 0.891
TSSC4
Tumor suppressing subtransferable candidate 4.
    
 
 0.859
ASCC3
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.845
AAR2
A1 cistron-splicing factor AAR2.
   
 
 0.827
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.