STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCR7C-C motif chemokine receptor 7. (393 aa)    
Predicted Functional Partners:
ENSCPBP00000025221
C-C motif chemokine 21c-like.
   
 0.989
CCL19
C-C motif chemokine 19.
   
 0.988
CXCL12
C-X-C motif chemokine ligand 12.
    
 0.880
CXCR5
C-X-C motif chemokine receptor 5.
  
 
0.851
ENSCPBP00000039306
T-cell surface glycoprotein CD5-like.
   
  
 0.844
CCL5
C-C motif chemokine 5-like.
   
 0.843
CXCR4
C-X-C motif chemokine receptor 4.
   
 
0.825
ENSCPBP00000027419
annotation not available
   
 
 0.807
CCL20
C-C motif chemokine ligand 20.
    
 0.760
ENSCPBP00000027751
annotation not available
    
 0.756
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.