Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
CCR7C-C motif chemokine receptor 7. (393 aa)    
Predicted Functional Partners:
ENSCPBP00000025221
C-C motif chemokine 21c-like.
   
 0.998
CXCL12
C-X-C motif chemokine ligand 12.
    
 0.977
CCL19
C-C motif chemokine 19.
    
 0.975
CCL5
C-C motif chemokine 5-like.
   
 0.972
ENSCPBP00000004785
C-C motif chemokine 22-like.
   
 0.965
CCL20
C-C motif chemokine ligand 20.
     
 0.962
ENSCPBP00000004799
Uncharacterized protein DDB_G0274915-like.
     
 0.953
XCL1
Monocyte chemotactic protein 1B.
     
 0.951
ENSCPBP00000013030
C-C motif chemokine 4 homolog.
   
 0.950
CXCL14
C-X-C motif chemokine ligand 14.
     
 0.942
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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