STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRF2BRF2, RNA polymerase III transcription initiation factor subunit. (415 aa)    
Predicted Functional Partners:
ENSCPBP00000014778
annotation not available
    
 0.982
GTF3C3
General transcription factor 3C polypeptide 3 (transcription factor C subunit 4).
    
 0.970
POLR3F
DNA-directed RNA polymerase III subunit RPC6.
    
 0.966
POLR3B
DNA-directed RNA polymerase III subunit RPC2.
   
 0.948
POLR3A
DNA-directed RNA polymerase III subunit RPC1.
   
 0.938
POLR1C
DNA-directed RNA polymerases I and III subunit RPAC1.
    
 0.918
POLR3C
DNA-directed RNA polymerase III subunit RPC3.
    
 0.908
POLR3D
DNA-directed RNA polymerase III subunit RPC4.
    
 0.907
ENSCPBP00000010497
annotation not available
    
 0.902
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.893
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (28%) [HD]