STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VIRMAKIAA1429 ortholog. (1822 aa)    
Predicted Functional Partners:
WTAP
Pre-mRNA-splicing regulator WTAP.
    
 
 0.996
ZC3H13
Zinc finger CCCH domain-containing protein 13.
   
 
 0.974
CBLL1
E3 ubiquitin-protein ligase Hakai.
    
 
 0.949
THOC2
THO complex subunit 2.
   
 
 0.890
METTL3
MRNA m6A methyltransferase catalytic subunit.
    
 
 0.815
METTL14
MRNA m6A methyltransferase non-catalytic subunit.
    
 
 0.769
YTHDC2
ATP-dependent RNA helicase YTHDC2.
    
 
 0.715
NUDT21
Cleavage and polyadenylation specificity factor subunit 5.
    
 
 0.641
CPSF6
Cleavage and polyadenylation specificity factor subunit 6/7.
    
 
 0.626
YTHDC1
YTH domain-containing protein 1.
      
 0.605
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.