STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCSD1CapZ-interacting protein. (404 aa)    
Predicted Functional Partners:
WASHC1
WAS protein family homolog 1.
    
 
 0.703
WASHC3
WASH complex subunit CCDC53.
    
 
 0.658
WASHC5
WASH complex subunit strumpellin.
   
 
 0.638
WASHC4
WASH complex subunit 4.
   
 
 0.601
VPS35
Vacuolar protein sorting-associated protein 35.
    
 
 0.542
VPS29
Vacuolar protein sorting-associated protein 29.
    
 
 0.419
ENSCPBP00000011174
Vacuolar protein sorting-associated protein 29-like.
    
 
 0.419
SLF1
SMC5-SMC6 complex localization factor 1.
    
 
 0.417
ENSCPBP00000005603
annotation not available
    
 
 0.417
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.