STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L4Dpy-19 like 4 (C. elegans). (720 aa)    
Predicted Functional Partners:
CCNQ
Family with sequence similarity 58 member A.
      
 0.530
TMTC3
Transmembrane and tetratricopeptide repeat containing 3.
   
  
 0.491
ENSCPBP00000010223
annotation not available
      
 0.485
NOC4L
U3 small nucleolar RNA-associated protein 19.
      
 0.485
HABP4
Intracellular hyaluronan-binding protein 4.
      
 0.478
TMEM9B
TMEM9 domain family member B.
      
 0.463
GK5
Glycerol kinase 5 (putative).
      
 0.461
CHMP6
Charged multivesicular body protein 6.
      
 0.450
WAPL
WAPL cohesin release factor.
      
 0.448
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase.
      
 0.448
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.