STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPBP00000007853Neural-cadherin-like. (2805 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin related 15.
   
0.631
JUP
Junction plakoglobin.
    
 0.610
CTNNB1
Catenin beta 1.
    
 0.610
ARVCF
Armadillo repeat gene deleted in velocardiofacial syndrome.
    
 0.446
CTNND1
Catenin (cadherin-associated protein), delta 1.
    
 0.446
PKP4
Plakophilin 4.
    
 0.446
ENSCPBP00000038322
annotation not available
    
 0.446
CTNND2
Catenin delta 2.
    
 0.446
USH1C
USH1 protein network component harmonin.
   
 
 0.437
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.