STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPEB1Cytoplasmic polyadenylation element binding protein 1. (561 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A.
   
 0.925
CCNB2
G2/mitotic-specific cyclin-B2.
   
 
 0.922
CDK1
Cyclin dependent kinase 1.
    
 0.922
TENT2
Poly(A) RNA polymerase D4, non-canonical.
   
 
 0.822
SYMPK
Symplekin.
    
 
 0.813
DDX6
ATP-dependent RNA helicase DDX6/DHH1.
   
 
 0.739
PARN
Poly(A)-specific ribonuclease.
    
 
 0.611
FMR1
Fragile X mental retardation protein.
    
 
 0.595
NGDN
U3 small nucleolar ribonucleoprotein protein LCP5.
      
 0.593
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 
 0.576
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.