STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPXSmall muscle protein, X-linked. (94 aa)    
Predicted Functional Partners:
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.715
ITGB1BP2
Integrin subunit beta 1 binding protein 2.
   
  
 0.642
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
      
 0.578
SERPINC1
Serpin family C member 1.
      
 0.578
MYOZ2
Myozenin 2.
   
  
 0.570
PDK3
Pyruvate dehydrogenase kinase 2/3/4.
      
 0.569
CASQ2
Calsequestrin 2.
   
  
 0.518
PRPS1
Phosphoribosyl pyrophosphate synthetase 1.
      
 0.483
PRPS2
Ribose-phosphate pyrophosphokinase 2.
      
 0.483
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
  
 0.480
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.