STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCRIBScribble planar cell polarity protein. (1512 aa)    
Predicted Functional Partners:
ADGRL1
Adhesion G protein-coupled receptor L1.
    
 
 0.729
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 
 0.702
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 
 0.691
RND2
Rho family GTPase 2.
    
  0.556
VANGL1
VANGL planar cell polarity protein 1.
    
 0.540
VANGL2
VANGL planar cell polarity protein 2.
    
 0.540
PPP1CB
Serine/threonine-protein phosphatase PP1 catalytic subunit.
    
 0.526
PPP1CC
Serine/threonine-protein phosphatase PP1 catalytic subunit.
    
 0.526
PPP1CA
Serine/threonine-protein phosphatase PP1 catalytic subunit.
    
 0.526
PHLPP1
PH domain and leucine-rich repeat-containing protein phosphatase.
    
0.518
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.