STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM83HFamily with sequence similarity 83 member H. (1131 aa)    
Predicted Functional Partners:
LAMB3
Laminin subunit beta 3.
      
 0.694
VRK3
Vaccinia related kinase 3.
    
 
 0.633
TTBK2
Tau tubulin kinase 2.
    
 
 0.625
ENSCPBP00000034973
annotation not available
      
 0.579
FAM20A
FAM20A, golgi associated secretory pathway pseudokinase.
      
 0.578
DLX3
Distal-less homeobox 3.
      
 0.576
CSNK1A1
Casein kinase 1 alpha 1.
    
 
 0.575
STIM1
Stromal interaction molecule 1.
      
 0.574
KIF22
Kinesin family member 22.
      
 0.572
VRK2
Vaccinia related kinase 2.
    
 
 0.546
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.