STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNCTenascin C. (1869 aa)    
Predicted Functional Partners:
ACAN
Aggrecan.
   
 0.878
CD40LG
CD40 ligand.
    
   0.801
BCAN
Brevican.
   
 0.671
ITGA9
Integrin subunit alpha 9.
    
 0.655
ITGAV
Integrin subunit alpha V.
    
 0.636
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.620
ITGB6
Integrin subunit beta 6.
    
0.611
ITGB3
Integrin subunit beta 3.
    
0.608
TNR
Tenascin R.
     
0.601
ITGA4
Integrin subunit alpha 4.
    
 0.569
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.