STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLOC1S4Biogenesis of lysosome-related organelles complex 1 subunit 4. (197 aa)    
Predicted Functional Partners:
BLOC1S6
Biogenesis of lysosome-related organelles complex 1 subunit 6.
   
 0.949
ENSCPBP00000028487
annotation not available
    
 0.930
BLOC1S3
Biogenesis of lysosome-related organelles complex 1 subunit 3.
    
 0.847
ENSCPBP00000011221
annotation not available
    
 
 0.646
SNAPIN
SNARE-associated protein Snapin.
    
 0.597
HPS6
HPS6, biogenesis of lysosomal organelles complex 2 subunit 3.
      
 0.577
BLOC1S2
Biogenesis of lysosome-related organelles complex 1 subunit 2.
   
 
 0.577
DTYMK
Deoxythymidylate kinase.
      
 0.477
PTPMT1
Protein tyrosine phosphatase, mitochondrial 1.
      
 0.400
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.