STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT19Keratin, type I cytoskeletal 19. (395 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
    
 0.706
UNC79
Unc-79 homolog (C. elegans).
   
 0.671
RANBP2
E3 SUMO-protein ligase RanBP2.
    
 0.484
WDR82
COMPASS component SWD2.
    
 0.454
ENSCPBP00000027812
Keratin, type II cytoskeletal 8-like.
   
 0.451
KRT8
Keratin, type II cytoskeletal 8.
   
 0.451
ENSCPBP00000027757
annotation not available
  
 
0.450
CPSF1
Cleavage and polyadenylation specificity factor subunit 1.
    
  0.447
KRT7
Type II keratin, basic.
   
 0.439
WDR33
Polyadenylation factor subunit 2.
    
  0.410
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.